EST details — SGN-E392186

Search information 
Request: 392186Match: SGN-E392186
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180595Clone name: TUS-34-M9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180595 is on microarray TOM1 spot ID 1-1-8.1.19.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27632 [cLEF-45-A21] Trace: SGN-T61227 EST: SGN-E246492 Direction: 5' Facility: TIGR
Clone: SGN-C180595 [TUS-34-M9] Trace: SGN-T193513 EST: SGN-E392187 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392186Length: 684 bp (858 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392186 [] (trimmed) AATCACCAAATATTGCATTAATACAAGTTTAAATAGTCACATGGCTAATAAAGTTTTGACATAAATGGCCTGGTACAAATTTATTTTTTGGTTCT
TTAACTTACTGATCACAATGTTTACTGATCTTTAACTTACTTTTACTGGCATATTATTAACCACTTCCCAACTAAAATATCCCAACCAACTCCCA
CTCCTACACGCCACCGTCAACAGTGGCCTTGTCGCCGGTTGAAACATCCGCTCTCATTTTAAGCCACTCAACGACATCTCCAAACACTTGCTCCA
CATTCTCCTCCATTTCTCCAACCACCTGGTGCCACATACCTGGATATATCTTCAGTGTTTTGTCCTTGCTTGTCAATCGGCCATATAGCTCCTCC
GCGCACGCGGGATCACAAATGACATCATCGCTGCCGTGGACGATCAGAAATGGTACTTTCACTTCTTCGAATCTCCCTTGCAGCTCCCTACATAC
TCTCATTAACTCACGCGCCGTCGCGGGGCGTGGTTTTATAAGTGGTCTCCTTGGACTTGCTATTGCCAATTTCCTCTTCCACTCCTCCTTGAATG
CAACCAAAGGCAACGAGCCGCGAGTGGGGACCACGGGCCAAGTCGGAATCAAAACGGCAGCGATACCAAGTAAATGTTCTAGAGGCCACGGCGGT
TTGAACTTATTGCTAATCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392186] SGN-U566786 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193512 [Download][View] Facility Assigned ID: FA0AAD22AG05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0143 Quality Trim Threshold: 14.5