EST details — SGN-E392287

Search information 
Request: 392287Match: SGN-E392287
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180786Clone name: TUS-35-E8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180786 is on microarray TOM1 spot ID 1-1-1.1.17.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C63575 [cLEM-2-B17] Trace: SGN-T83931 EST: SGN-E269466 Direction: 5' Facility: TIGR
Clone: SGN-C180786 [TUS-35-E8] Trace: SGN-T193861 EST: SGN-E392535 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392287Length: 671 bp (853 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392287 [] (trimmed) GCCATTTATGGGGGGCCCACCTCATACGTCTCCGCCTTTTATACCTACCCCCATGCCTGTACAGCCCTATCAACCTCCCATGGTTTACTCTGAAG
TTCCACCATTATTTTATTTTCCAGGTCCGTTCCCTGATTCACTAAAAATGCCTATGCTTTCTCCTGTACCACCTGTCTATTTTCATCTTCCAGAT
ACCCAGTTGCACAATATAATACTGAACCAGATACATTATTATTTCAGTAATGAAAATTTAATTAAGGACATATTCTTGCGAGAGCAGATGGATGA
ACAGGGATGGGTACCACTTACGCTAATAGCAGGATTCAAGAAAGTAATGGAGTTGACGGATAATATACAACTGATACTGAATGTTGTGAGGTCCT
CTACTGTTGTAGAACTGCAGGGTGAAAAGTTAAGGCGGAGAAATGACTGGTCTCATTGGCTGATACCAGCATCAGTACATAATTCAACCATGTCA
AGTCCTCAATCTCCTCAAATGCCTAGTCCTGATTTGCTTGCAGAAAATCTCCAACGTGTTGTATTTGATTATAAGACTACAGGACATGGAAACAC
TGAAGCACATCTTAGTAGATCATCATCTACTGCATTAAGTAGTCCATTTCTGCAGTTTGACAATGAGATGGTTGAACAAGCTGATGCTCACCATT
CACAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392287] SGN-U573253 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193613 [Download][View] Facility Assigned ID: FA0AAD23BC04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0094 Quality Trim Threshold: 14.5