EST details — SGN-E392372

Search information 
Request: 392372Match: SGN-E392372
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180912Clone name: TUS-35-J14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180912 is on microarray TOM1 spot ID 1-1-3.2.17.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1233 [cLEC-11-F9] Trace: SGN-T25729 EST: SGN-E201782 Direction: 5' Facility: TIGR
Clone: SGN-C180912 [TUS-35-J14] Trace: SGN-T193948 EST: SGN-E392622 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392372Length: 245 bp (845 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392372 [] (trimmed) AATTTTTCGACGCTCGTCGAAGCCCAGCAGCATTAGAAGGCTCAGAAGGACGAAGAGGGTTAAGAGTTAGAGTATTCTGAAGAGGGTTAGCAGAA
ATAGTGGACTTGAATTTGGAATTTGTAGGTGGAAGAGAAGAAGCTGAAAGTGAGAGATTTGTAAGAGATGAAACTTGAGTTGGGATTTTGACTTT
GTTTGGTTTGTTGAAAAGGGTTGAGATTTTAGGAGGATTGAGGAAGTGGGTTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392372] SGN-U580370 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193698 [Download][View] Facility Assigned ID: FA0AAD23DE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.855 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5