EST details — SGN-E392477

Search information 
Request: 392477Match: SGN-E392477
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181224Clone name: TUS-36-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181224 is on microarray TOM1 spot ID 1-1-3.3.15.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15212 [cLED-11-E17] Trace: SGN-T51279 EST: SGN-E235269 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E392477Length: 377 bp (900 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392477 [] (trimmed) CAATTTTTAGCTCACTCTCATGTACCGAACTTCCCCGAAAATCTCTTCTTAAAAATACACTTATTGCTGCTCAAAATAAAAACACATGGCAACAT
CAAACCGGTCATATTAGTTTTCATAAAAGTTTGGAAATTACAAATAATCTTGAAACTAATTAAGCTGGAAGGTAGAATAGCAAATTATACACTGA
GAGCAAAAATTTTCAGGAAACTCCAACTTGTGTTGTAAAATTGATCATTGAGAAAGTGGCAAACTTTCTTGGAAAACAATTTCAAAAACCAGGAA
GAGTCATTCTTTAAGTCATTTGAAAAGGTTCTTAAGTCCATCAAATAAATTCAAAGCCCTCAATTCTCCACTCCTTATGTCCCTCAATCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392477] SGN-U589354 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193803 [Download][View] Facility Assigned ID: FA0AAD24BD07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.896 Expected Error Rate: 0.0134 Quality Trim Threshold: 20.5