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EST details — SGN-E392606

Search information 
Request: 392606Match: SGN-E392606
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180764Clone name: TUS-35-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180764 is on microarray TOM1 spot ID 1-1-7.4.17.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C10704 [cLEC-6-A16] Trace: SGN-T23947 EST: SGN-E202286 Direction: 5' Facility: TIGR
Clone: SGN-C180764 [TUS-35-D10] Trace: SGN-T193678 EST: SGN-E392352 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392606Length: 410 bp (908 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392606 [] (trimmed) GGCGATTGGGTCCGGGCCCCCCCTTTTTGTTAAAATTATATTTCAACAAGTTTGAATTTTAAATGGCTTCTTCAGGTGGAAATATGAACACTTTT
ATGAATTCATTTAACTCATTTTCTTCTTCTCAATTCATGACTTCTTCGTTTAGCGATCTTCTTTCGGACAATAATAATAATAATAATGATAATAA
GAATTGGGGATTTAGCGACGATAGAATTAAGTCATTTCCAATGATGAACTCATCAACATCACCTGCTTCGCCTTCCTCTTATCTTGCTTTTCCTC
ATTCATTAAGTCCATCTATGCTTTTGGACTCACCCGTTTTGTTCAACAATTCTAATACTCTTCAATCGCCAACTACAGGGAGTTTTGGTAGTTTG
AACTCTTTTTTTTGGGAATTCGAGGAATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392606] SGN-U577212 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193932 [Download][View] Facility Assigned ID: FA0AAD23DB05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0012 Quality Trim Threshold: 20.5