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EST details — SGN-E392613

Search information 
Request: 392613Match: SGN-E392613
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180816Clone name: TUS-35-F14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180816 is on microarray TOM1 spot ID 1-1-3.2.17.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14268 [cLEC-7-G11] Trace: SGN-T25211 EST: SGN-E201929 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392613Length: 693 bp (861 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392613 [] (trimmed) GGCCCCCCCTCGAGACTATTTCTCTATCTTCTCTACTTGTATTTAGAGCTCTGTGACATGATAGATGGGGTGAAACAACATTTCTCGGCTCTTAG
AAGCCTCTGAGTTTCCATCTGCATTGGGGTTATTCTGTTTTCTACATCATGATTTCAAATTTGCAGCTCATAGAGCATTTAAGTTCTCGTGCCAG
ATGCACGATGAAGTAACAGTAATTAAGAATGTTGTGCTACTGAAGCACGGCCTTGTTGCAGACGGTTGAACTCTGAAACAAGGTTTCGTGCCTGT
AAATAGAAAATTATCATATCAGCAGGAGTGTTACTTATAGTATAAATTAGTAGGATTGTTTGTTGAAAATGGTGAAAAATGGAAATGTAGTGATG
CAAAAATATGAATTGGGGAGATTATTAGGTCAAGGCAACTTTGGTAAGGTTTATTATGGAAGGGATCTGGAAAGCGGACAAACTGTAGCCATTAA
AGTAATTGATAAAGAGAAGGTTCAGAAAGCTGAATTGACTGAACAGACGAAACGAGAGATATCCGTTATGGCAATGGTCAAACATCGACATGTTG
TGCAGCTATACGAGGTCATGGCAACCAAGAGTAAGATTTACTTTGTGATCGAAAATGCCAAAGGTGGCGAGCTTTTCACAAACTGACAAAGGGGA
GGCTCCCAAAAAATGTTGCTAGAAAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392613] SGN-U572172 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193939 [Download][View] Facility Assigned ID: FA0AAD23DC07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0038 Quality Trim Threshold: 20.5