EST details — SGN-E392617

Search information 
Request: 392617Match: SGN-E392617
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180862Clone name: TUS-35-H12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180862 is on microarray TOM1 spot ID 1-1-5.4.17.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14849 [cLEC-9-E9] Trace: SGN-T25020 EST: SGN-E200726 Direction: 5' Facility: TIGR
Clone: SGN-C180862 [TUS-35-H12] Trace: SGN-T193691 EST: SGN-E392365 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392617Length: 373 bp (880 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392617 [] (trimmed) AGTTGTAAAAAGTGAACGTATCCTTTGTATGAAGTCCAGAAAGAGTACAATAATGCGGATCTCTTTCAAGGAAGAATGTTTGCTCATCTCCTACT
CCCCATCCAATAAGTCTACCTTACATCAAATCAGTTGGATATTAAATTTCCAATACAGATGAATTTATAAAGACAACTTCGTTGTCATTAATTCA
TAGCAGCAAATGTATCTCCATATCTTTGCATAACTTTTTTAGTTGCTAAAGCAGCAGCCTCACTTGGACGCAATGTCCCAGTAACCATGATTGCA
GCAAATTCACGGGTGATTTCCTCTTGTATTTTTTTTTTAGCATCACCAAGAGGATCTTTCGTTAGGGGAGTAGAAAGGGGACTTCTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392617] SGN-U567176 Tomato 200607 Build 2 78 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193943 [Download][View] Facility Assigned ID: FA0AAD23DD06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.929 Expected Error Rate: 0.0134 Quality Trim Threshold: 14.5