EST details — SGN-E392804

Search information 
Request: 392804Match: SGN-E392804
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181448Clone name: TUS-36-P22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181448 is on microarray TOM1 spot ID 1-1-3.4.14.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20203 [cLED-29-K4] Trace: SGN-T56220 EST: SGN-E239932 Direction: 5' Facility: TIGR
Clone: SGN-C181448 [TUS-36-P22] Trace: SGN-T194222 EST: SGN-E392896 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E392804Length: 657 bp (816 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392804 [] (trimmed) CATCAGCCTGACAGGAATAACAGTAGGAAGCAAGATCACTGATCTTGATTTCACAGCCATTTTCGACTCTGGCACTTCATTCACATACTTGAACG
ACCCAGTTTACAAAGTCATTACAGAAAACTTCGATTCTGAAGCAAAACAGCCACGTATTCAACCTGATGGCACAATTCCTTTTGAGTACTGCTAT
GGGATAAGTGCAAATCAAACTACATTTGAAGTTCCAGACGTAAATTTGACAATGAAAGGTGGCAACCAATTTTATCTTTTCGATCCGATAATAAT
GCTCTCACTCCCGGACGGTTCAGGCGCATACTGTTTAGCTGTTGTGAAAAGTGGGGATGTCAACATCATTGGACAAAATTTCATGACTGGCTATC
ACGTAATATTTGATCGGGAGAAGATGGTTTTGGGTTGGAAAGCCTCTGATTGTTATGATTCTGGAGAATCAAACGATAGATCAACAACTCTGCCC
GTGAACAAGCGCAATTCTACCGAAGCGCCTTCGCCTGCCAGTGTGGTGCCCGAGGCCACCAAGGGAAATGCAAGTGCAAATGAACCCGCTACATC
GTTCCCATCTGTTCCATCATCTAGACCTGCAGGAAACCATGCACCACATTTGAATTCCTTCTATTACCAACTTATGATGGCTATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392804] SGN-U574299 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194130 [Download][View] Facility Assigned ID: FA0AAD24DH11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5