EST details — SGN-E392876
| Search information |
| Request: 392876 | Match: SGN-E392876 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181294 | Clone name: TUS-36-J12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181294 is on microarray TOM1 spot ID 1-1-5.2.14.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C19379 [cLED-26-J18] | Trace: SGN-T55369 | EST: SGN-E241175 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181294 [TUS-36-J12] | Trace: SGN-T194105 | EST: SGN-E392779 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E392876 | Length: 589 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E392876 [] (trimmed)
TTCTTGAACTGAGGTTCTTAGATAATCCTCCAATTGAGGGAATGAATCACAAGTTGAAGTGGCATAACGGATGGCAGACAAGAAAACTTCTTTTG
TGCCACTTAATTCTGCTTCTTGTATATCCGAAAATATGGGCATGGTATAAGAACTAAGTTTCGAAAATTTCCTATTATCTTGTACTTGTTATTCT
CCAAGGAAAAACCAAACGACTGAGCTACGAAAAATCGAGGACTTTAAACAATATCAAAAGCACATCCAAGAGAGTAGTCCACCTGAACCCGAAAA
GGGTCAATCTAGACGAATAAAACAAAGATTTGAAAGAAACAAGACTTGTGAGAAGGAGTTGCAATAACGAAAAACAAAATGCAGACTGCAAAAAG
AGTTCTATAACAAGCTAAAACATAACCAGATTACTACCTAGAGTGCACTGTTCAAAGTGTAATCCGTAATAAACGGGAGAAACAAGACCAAATCA
TCTGCTTAACATAAACGAGACGTAAAAAATTGAATCTTGGGCCTAACTCAATCCCACAAAGCTCGAAGAATGATTGCCGAAATCCATATAAGAAG
TCCAAACTCACCACATCCC
TGCCACTTAATTCTGCTTCTTGTATATCCGAAAATATGGGCATGGTATAAGAACTAAGTTTCGAAAATTTCCTATTATCTTGTACTTGTTATTCT
CCAAGGAAAAACCAAACGACTGAGCTACGAAAAATCGAGGACTTTAAACAATATCAAAAGCACATCCAAGAGAGTAGTCCACCTGAACCCGAAAA
GGGTCAATCTAGACGAATAAAACAAAGATTTGAAAGAAACAAGACTTGTGAGAAGGAGTTGCAATAACGAAAAACAAAATGCAGACTGCAAAAAG
AGTTCTATAACAAGCTAAAACATAACCAGATTACTACCTAGAGTGCACTGTTCAAAGTGTAATCCGTAATAAACGGGAGAAACAAGACCAAATCA
TCTGCTTAACATAAACGAGACGTAAAAAATTGAATCTTGGGCCTAACTCAATCCCACAAAGCTCGAAGAATGATTGCCGAAATCCATATAAGAAG
TCCAAACTCACCACATCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E392876] | SGN-U564526 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T194202 [Download][View] | Facility Assigned ID: FA0AAD24DE06FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 20.5 |
Working
