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EST details — SGN-E393102

Search information 
Request: 393102Match: SGN-E393102
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181867Clone name: TUS-38-B9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181867 is on microarray TOM1 spot ID 1-1-8.2.10.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82245 [cLET-1-F4] Trace: SGN-T102504 EST: SGN-E292230 Direction: 5' Facility: TIGR
Clone: SGN-C181867 [TUS-38-B9] Trace: SGN-T194429 EST: SGN-E393103 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393102Length: 316 bp (875 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393102 [] (trimmed) AAATTGGCAAATAGACACTTGAATTCTCCTACCATAACAAGGTGCATCGTCATATTTAATATCAAATTATTTATCAAGGACAGTACAGGACACCA
AAGACAAACACAAAAAGAGAAAGTCTAGACTATGATAGAATTGGTTTAATAAACTTTTGCCACCAACACATGGCACAGATCATTTACAGCATCAA
AAGCATGCATCCAAGAGACAGCAACAGCACAGAGCAGCCAAACATCCTTCCATGAAACCAGTACCAGATTGCTGTTGTTGTTGATGAGGAGGTGG
AGCACCTTACTGAGGTGCATACTGTGGAAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393102] SGN-U578223 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194428 [Download][View] Facility Assigned ID: FA0AAD26CA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5