EST details — SGN-E393137
| Search information |
| Request: 393137 | Match: SGN-E393137 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C182051 | Clone name: TUS-38-J1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182051 is on microarray TOM1 spot ID 1-1-8.2.10.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182051 [TUS-38-J1] | Trace: SGN-T1700 | EST: SGN-E378440 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C182051 [TUS-38-J1] | Trace: SGN-T194710 | EST: SGN-E393384 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E393137 | Length: 568 bp (848 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E393137 [] (trimmed)
AATTTCCTATAAAGAGAGTAAAGCAATACCTAAAAACGAAAGATACATCCTTTTATTTTCATTGATCTTCAAGTCATAAAAAGAAGAAAAAGATC
ATTTTGTTCCTAGATATCGATCGATCGTGTAGGTAGAATGGGAAGGCCACCTTGCTGCGATAAAATAGGGGTGAAAAAAGGACCATGGACACCAG
AAGAAGATATCATCTTGGTTTCATACATTCAACAACATGGTCCTGGTAACTGGAGAGCTGTTCCCAGTAATACTGGTTTGCTTAGATGCAGCAAA
AGCTGTAGGCTCAGATGGACTAATTATCTCCGGCCCGGAATTAAACGTGGAAACTTCACTGAACATGAAGAAAAAATGATTATCCATCTTCAAGC
TCTTCTAGGCAACAGATGGGCTGCGATTGCTTCGTATCTCCCACAAAGGACAGATAACGATATAAAAAATTACTGGAATACTCATCTGAGGAAAA
AGCTGAAGAAACTTCAAGGGAATGATGAGAATAGTACTCAAGAAGGAGAAAGCTCATCATCATCACAATCCAATTTCTCAAAGGGACAGTGGG
ATTTTGTTCCTAGATATCGATCGATCGTGTAGGTAGAATGGGAAGGCCACCTTGCTGCGATAAAATAGGGGTGAAAAAAGGACCATGGACACCAG
AAGAAGATATCATCTTGGTTTCATACATTCAACAACATGGTCCTGGTAACTGGAGAGCTGTTCCCAGTAATACTGGTTTGCTTAGATGCAGCAAA
AGCTGTAGGCTCAGATGGACTAATTATCTCCGGCCCGGAATTAAACGTGGAAACTTCACTGAACATGAAGAAAAAATGATTATCCATCTTCAAGC
TCTTCTAGGCAACAGATGGGCTGCGATTGCTTCGTATCTCCCACAAAGGACAGATAACGATATAAAAAATTACTGGAATACTCATCTGAGGAAAA
AGCTGAAGAAACTTCAAGGGAATGATGAGAATAGTACTCAAGAAGGAGAAAGCTCATCATCATCACAATCCAATTTCTCAAAGGGACAGTGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E393137] | SGN-U570718 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T194463 [Download][View] | Facility Assigned ID: FA0AAD26CE01RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0010 | Quality Trim Threshold: 14.5 |
Working
