EST details — SGN-E393204

Search information 
Request: 393204Match: SGN-E393204
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181999Clone name: TUS-38-G21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181999 is on microarray TOM1 spot ID 1-1-4.3.10.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C4577 [cLEC-28-B1] Trace: SGN-T28967 EST: SGN-E205480 Direction: 5' Facility: TIGR
Clone: SGN-C181999 [TUS-38-G21] Trace: SGN-T194664 EST: SGN-E393338 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E393204Length: 624 bp (862 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393204 [] (trimmed) TCTTTTTTTCCAACAATTTTTCTCTCTCACACACCATTTCTTTAATCAAATTTTCTGATGAATTTTCTTGTGATTGAAACTATGAATTTGTGATC
GAATTAAAAGCTGTGATTGTTAGAGTTCTGCTGAGGATTAAGTGCTTTTTTTCTCTACAAAACTTTGTAATTCAGGCAAAATGAGCTCTTTGCAA
GGGCCTGTTGTTTGTCCTCTGGTTCATGTAAAGCAAACAGGTAGACTCACTTCACCTATAGTAAAGGCTAAGATGCTGAGGAGTACTGAGTTTTG
GGGATTTAATGGGATACATAGACGGCGGATTAATGTGGTTCGTCTACCACGATCACGTATAAGCAAGTTGATCGTATGTAGTTTCAATTCATCAT
CAAATGACAGTGGTGGCATGGCCGGGAATTTTAAAGAAACTGATGCTGATTATGTGAATTCTAGCGTGGTTGAAGCTGTTGAAGTGCAAAGCGGG
AAAGATGGTTTCATGATCAAGATGAGAGATGGAAGGCATGTGAAATGCGTCCCTAACAATCCGCAGGGGGTTCATGTACATAACTATGCTCCAAA
CCCCGCTATTGTGCTAAAAATGGAGGATGGGACGGGGCTGCCTTCTCCCAATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393204] SGN-U578509 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194530 [Download][View] Facility Assigned ID: FA0AAD26AD11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5