EST details — SGN-E393322

Search information 
Request: 393322Match: SGN-E393322
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181893Clone name: TUS-38-C11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181893 is on microarray TOM1 spot ID 1-1-6.3.10.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181893 [TUS-38-C11] Trace: SGN-T194512 EST: SGN-E393186 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393322Length: 687 bp (824 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393322 [] (trimmed) AGCCAACTCCAACTTGTTTAGGAGTGAGGTCGTTGCACAGAAACAAAAGACGATGCACGAAGACGGTGCAGCACAACTTAACATTAAATTGAAGA
ACAAAGTTCATCTGGATAGTTGAATTACTTCACTCCACCTAATGAGCAAATACAACAATACAACTATAGGTGCATATTCCTCTCAAAGATGCATT
CATTGAATAGAAAAATCTCAGAGAATTTAAATATTAGAAGCACTAAGTGCCATAACCTTGCATTGTTCATTCATGGCTAAGAGTTGTGCTTCTTT
CTTGTCAAGAAGAGTTGTCAACTTCACATTTTCTTCTATAAGCTTTTGGACTTGAACTTCTTTCTGCATTTTCTCACTCTCCAATTGAGTTGTCT
TTGCAGCTAACCGTTCAAAAAGCTTTTCAATTGTCTGGAATTGTTTTTCTGATGACAGAAGAGTTTCTCTGACACTAATGAGACCACTGACATAG
GATTTCAGAGATTCGAAGTCTCTCTTAACACAACAAAGCTCCTGCTCATTTTCTGCAGCTCGCTGTCTCTGTCTAGAAGTTTCTTCGACCAAATC
TTCAACTCTCTGGCGCATCTCATTCAAGATACAATTTGTACCAAAAGCAAACCTTTCCATCTCTTCTAACTTAGTAGACATGTTTTCAATCTGAA
GTGCTCTTCTTTGAATCTCTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393322] SGN-U576697 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194648 [Download][View] Facility Assigned ID: FA0AAD26AB06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0045 Quality Trim Threshold: 12.5