EST details — SGN-E393360

Search information 
Request: 393360Match: SGN-E393360
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181881Clone name: TUS-38-B23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181881 is on microarray TOM1 spot ID 1-1-2.2.10.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82354 [cLET-1-K9] Trace: SGN-T102395 EST: SGN-E292121 Direction: 5' Facility: TIGR
Clone: SGN-C82354 [cLET-1-K9] Trace: SGN-T102396 EST: SGN-E292122 Direction: 3' Facility: TIGR
Clone: SGN-C181881 [TUS-38-B23] Trace: SGN-T199323 EST: SGN-E397997 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393360Length: 401 bp (826 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393360 [] (trimmed) TAGAAGAGGTAACATCTCCACCATTATAGAATTGTAGCATCAAATTATATTCCACAAAGCAAATGGATATACTTGACATATTCCCATATGCCACC
TATGTCTTCCATTATATCTCAAGTGCTGATCTGAAGAATGACGGGGATGTCATGCTTCAAGAGACTGAGAACTTTTTTCTCAAGAAAACGGGAAG
CACAAGATAACATCCCTTGCACAAGCATAAACGTCTTATTTTTCCACAGAAATAACACCCATGTAGCCAAGAAAATCCAGAACCATCGATCCATA
CAAAGGCACAAGCACCCATAATGGCTATTTTATTTTAGGGCTAACAAAAAAAAGTTGTCCATGTATATAAACTACAGTTAAAAAATGGAATATAA
ATTTTAGAAACCAAGAAGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393360] SGN-U563352 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194686 [Download][View] Facility Assigned ID: FA0AAD26CA12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0094 Quality Trim Threshold: 14.5