EST details — SGN-E393622

Search information 
Request: 393622Match: SGN-E393622
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183617Clone name: TUS-42-K7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183617 is on microarray TOM1 spot ID 1-1-2.3.2.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26006 [cLEF-2-K11] Trace: SGN-T59100 EST: SGN-E244817 Direction: 5' Facility: TIGR
Clone: SGN-C183617 [TUS-42-K7] Trace: SGN-T194948 EST: SGN-E399561 Direction: 5' Facility: INRA
Clone: SGN-C183617 [TUS-42-K7] Trace: SGN-T200251 EST: SGN-E399175 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393622Length: 656 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393622 [] (trimmed) ACTGCACTAATGACAACCATTTGGTTAGCTGCCATCTTTACTCAAATCAAAATTATACACTTCCATTATTTTGTACTTCTTTCATGTTGGAACAA
TCAAAATTTTTTGCTTGGACACAAAAAAAAGAAGCATATATGTTCTATTCTAATGGAGGACTAATCCTTCATACCAACTCTATAAATTGAAAAAG
TACATTTCTCTATGAAACAATGGTACATCCCTCTTGAATTGCAAGGTGTTATAGCATTTCTTTTCACACTTCTCTGAGGGTAATGGAGTCCAAGG
GCCTCACCAAGGCGGATGATCGTCTACTGTAGAGTTAGGAGGAGCTGCTTTCCAGCCAGGTTTCTCATCCCAATACATATCATAGTATATGTGAC
CTGGTGTGTGATTTTCCACACAACACCAAATGCCTACATACCTCTTGACACGATTCCTGAATTGTTCTTCCCTTGTCTTGTCAGTAAATCGATCA
AAGGCATCTTGCATTGTTGAGAACTGGATTACTTTCACATCCTTAAACTTGGAGAATACCGTCTTCAACGTTTCTTCTGTACTATGTTTGGGAAG
TTTGAGAGCCCCACTTTGACTCGTACTGTTAACCTGACAGCCCGGTGACCCTTCTTGGCAGAAATGTACATCAAGCCATGACTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393622] SGN-U582794 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194948 [Download][View] Facility Assigned ID: FA0AAD30AF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5