EST details — SGN-E393853

Search information 
Request: 393853Match: SGN-E393853
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183121Clone name: TUS-41-F15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183121 is on microarray TOM1 spot ID 1-1-2.2.3.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183121 [TUS-41-F15] Trace: SGN-T195337 EST: SGN-E394011 Direction: 3' Facility: INRA
Clone: SGN-C183121 [TUS-41-F15] Trace: SGN-T195337 EST: SGN-E398858 Direction: 3' Facility: INRA
Clone: SGN-C183121 [TUS-41-F15] Trace: SGN-T195338 EST: SGN-E394012 Direction: 5' Facility: INRA
Clone: SGN-C183121 [TUS-41-F15] Trace: SGN-T200154 EST: SGN-E398859 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393853Length: 228 bp (933 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393853 [] (trimmed) TCAAGCTCAAACATACAGCAAGGTGGAAGGCAGCTAAATATACATCTCTGGGAAGTATCCAGTCCTACTAAAAAAGTGAGCTGAGGGAAAAACAC
TTCACAGTGTTTCTTGACCATTTATGCTAACAAAATAGTTGTAATTCAGTATAATCAATCATATAACTGTATAGTCAAGAAGTTGTATAATGTCT
ATGTTACACCATTTTCAACCTTTTCCCACATTTGATCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393853] SGN-U568248 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195179 [Download][View] Facility Assigned ID: FA0AAD29CC08FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0153 Quality Trim Threshold: 14.5