EST details — SGN-E394026

Search information 
Request: 394026Match: SGN-E394026
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183347Clone name: TUS-41-P1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183347 is on microarray TOM1 spot ID 1-1-8.4.3.7 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394026Length: 558 bp (830 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394026 [] (trimmed) AAGAAAAAAGTATTTGATCAAACTCGTGAGTGAGTACAACTTTCATGTTACAGTCCCCAAAAAGGTATAAAAATCTAAAATAATCGTAACCACAA
TAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCTAATCTCAACAAATACTTCCATGGGAC
AACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACAGTAAAACCAAAAAATAATAACTTCAA
TATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAATGCACCACATGGTCTTCATGAGAACT
GTGAATTGTCATATATCATGAAAACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTAGCATCATAATATGCTTAATAAAACC
CCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAAAAGAATGACCAAGCTACCATACTGTGTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394026] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195352 [Download][View] Facility Assigned ID: FA0AAD29CH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.937 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5