EST details — SGN-E394136

Search information 
Request: 394136Match: SGN-E394136
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182935Clone name: TUS-40-N21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182935 is on microarray TOM1 spot ID 1-1-4.2.5.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133123 [cTOD-4-N13] Trace: SGN-T142630 EST: SGN-E330465 Direction: 5' Facility: TIGR
Clone: SGN-C182935 [TUS-40-N21] Trace: SGN-T195461 EST: SGN-E394135 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E394136Length: 506 bp (853 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394136 [] (trimmed) GAAAAAATTTAAAAAAAAAGAAAAAAAAATGGATATGAAAATCAAGTTTGTTTATTTTGGATTGGGTGTGTTATTTCTAGCACATTTTGGAGAAT
CTCAAAATGCAACTTTTGATATAACCAAATATGGTGCCACAGCCAATGCTGATATTAGTGAGGCTGTTGGAAAAGCTTTTAAAGAGGCATGTGCA
TCAACAAGTCCAAGTACAATTGTGATCCCAAAAGGAACATTCCAAATGAACCAAGTGCTATTAGAAGGACCATGCAAAGGCCCTATTGAACTTCA
AATTCAAGCCATTTTGAAAGCACCAACAGATCCTAATGCAATTAAAACTGGTGAATGGTTAACAGTAAACAAACTTGATTTCTTCACAATGTCTG
GTGGTGGAACACTTGATGGTCAAGGTAAAGAAGCATGGGAATGCAAAAAGTCAAAAAAGTGCACCAAGCTTCCCAATAATTTGAGCTTCAACTCC
CTCACAAATTCCATAATCAAGGAAATAACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394136] SGN-U574366 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195462 [Download][View] Facility Assigned ID: FA0AAD28CG11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.921 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5