EST details — SGN-E394215
| Search information |
| Request: 394215 | Match: SGN-E394215 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183684 | Clone name: TUS-42-N2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183684 is on microarray TOM1 spot ID 1-1-7.2.1.1 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C183684 [TUS-42-N2] | Trace: SGN-T194994 | EST: SGN-E393668 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183684 [TUS-42-N2] | Trace: SGN-T194994 | EST: SGN-E399483 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183684 [TUS-42-N2] | Trace: SGN-T195542 | EST: SGN-E394216 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E394215 | Length: 621 bp (824 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E394215 [] (trimmed)
AAAAAAAAAAGTATTTGATCAAACTCGTGAGTGAGTACAACTTTCATGTTACAGTCCCCAAAAAGGTATAAAAATCTAAAATAATCGTAACCACA
ATAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCTAATCTCAACAAATACTTCCATGGGA
CAACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACAGTAAAACCAAAAAATAATAACTTCA
ATATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAATGCACCACATGGTCTTCATGAGAAC
TGTGAATTGTCATATATCATGAATACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTAACATCATAATATGCTTAATAAAAC
CCCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAGAAAAATGACCAGGCTACCATACTGTGTTAATGATGCACCCG
ACAGATTTCGACAAGCAACAGCAACAAGTTTAGGAGTTAAAAGTTGAGTGT
ATAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCTAATCTCAACAAATACTTCCATGGGA
CAACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACAGTAAAACCAAAAAATAATAACTTCA
ATATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAATGCACCACATGGTCTTCATGAGAAC
TGTGAATTGTCATATATCATGAATACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTAACATCATAATATGCTTAATAAAAC
CCCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAGAAAAATGACCAGGCTACCATACTGTGTTAATGATGCACCCG
ACAGATTTCGACAAGCAACAGCAACAAGTTTAGGAGTTAAAAGTTGAGTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E394215] | SGN-U578456 | Tomato 200607 | Build 2 | 466 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T195541 [Download][View] | Facility Assigned ID: FA0AAD30DG01FM2 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.928 | Expected Error Rate: 0.0145 | Quality Trim Threshold: 14.5 |
Working
