EST details — SGN-E394261

Search information 
Request: 394261Match: SGN-E394261
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172859Clone name: TUS-14-K1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172859 is on microarray TOM1 spot ID 1-1-8.3.20.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14149 [cLEC-7-A19] Trace: SGN-T25201 EST: SGN-E201919 Direction: 5' Facility: TIGR
Clone: SGN-C172859 [TUS-14-K1] Trace: SGN-T195130 EST: SGN-E393804 Direction: 3' Facility: INRA
Clone: SGN-C172859 [TUS-14-K1] Trace: SGN-T195130 EST: SGN-E398954 Direction: 3' Facility: INRA
Clone: SGN-C172859 [TUS-14-K1] Trace: SGN-T195131 EST: SGN-E393805 Direction: 3' Facility: INRA
Clone: SGN-C172859 [TUS-14-K1] Trace: SGN-T195316 EST: SGN-E393990 Direction: 5' Facility: INRA
Clone: SGN-C172859 [TUS-14-K1] Trace: SGN-T195587 EST: SGN-E398955 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394261Length: 490 bp (844 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394261 [] (trimmed) AAAAAAAATGAAAATTAAAATAAAAGAAGATCGTTCAACTTTGTTTAATATCTACTAATGCCCCTTAACAAAGAAATTTTCTCAAAAACTGTACT
CTTCTCGACTTTCATGGTAGTAAATCCCTGCTTAAATCTGTTGCTATAAAATTTAGCAAGCTAATTTCTTCAACCATTTTGAGTAACAAAAGCAC
CTAATGGCAAAATCACCACACAGTTTAGTGCTCCAGATGGAAGACATATTCCGTCAAGCACTGTAATTTACTGGGGTCTAACTTCTGTTCAGTTA
TAACTGCTTGTTTCTTCACAGTAAGCATTTGAGATGCCGAATCCAAAGCCCAACCCTGTTGCATCACATAGTTTGTAGCATCATTTTCATTCAAT
CCCAGAAAGTGAGCTGAGTCTTGTGTGCTAATGGCTGAATAACCGAAAAAAAGGAGCCCGAACATCCTTTTTCTGTATAATTCTGCAAAGGACAC
CCCAAAGGGCTGAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394261] SGN-U583394 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195587 [Download][View] Facility Assigned ID: FA0AAD2AF01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0274 Quality Trim Threshold: 12.5