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EST details — SGN-E394314

Search information 
Request: 394314Match: SGN-E394314
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183363Clone name: TUS-41-P17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183363 is on microarray TOM1 spot ID 1-1-8.4.3.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183363 [TUS-41-P17] Trace: SGN-T195197 EST: SGN-E393871 Direction: 3' Facility: INRA
Clone: SGN-C183363 [TUS-41-P17] Trace: SGN-T195355 EST: SGN-E394029 Direction: 3' Facility: INRA
Clone: SGN-C183363 [TUS-41-P17] Trace: SGN-T195355 EST: SGN-E398883 Direction: 3' Facility: INRA
Clone: SGN-C183363 [TUS-41-P17] Trace: SGN-T200162 EST: SGN-E398884 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394314Length: 662 bp (841 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394314 [] (trimmed) GCAGTTCCTCCATTGAAAAGAACTATGAGTTGCCAGATGGACAGGTTATTACCATTGGTGCTGAGAGGTTCCGTTGCCCAGAGGTACTCTTCCAA
CCATCAATGATTGGAATGGAAGCTGCGGGTATCCATGAGACTACATACAACTCCATCATGAAATGTGATGTAGATATTAGGAAGGACCTCTATGG
TAACATTGTTCTCAGTGGTGGCTCCACCATGTTCCCTGGTATTGCTGATCGGATGAGCAAGGAAATCACTGCTTTGGCTCCAAGCAGCATGAAAA
TTAAGGTTGTTGCACCACCTGAGAGGAAGTACAGTGTCTGGATTGGAGGATCCATTCTTGCATCCCTCAGCACATTCCAGCAGATGTGGATCTCA
AAGGGCGAGTATGATGAGTCTGGTCCTTCCATTGTCCACAGAAAGTGCTTCTAAGGTGCTGCTATAATTACTTAAAAGTGCGAGTGTCCTGTCTG
TTTCCCGGTTTTGCTATTATGTTGCCAGTCAATTTGTTTTTTTGATGGGATGGAGAAGTTTGGTGGTGGGGGCTATGAATGCACGGTAGCAAACA
ACAGATTGCCAGTATTATCTCATGTTTCCATTTAATGTGGTTAATATTCTCTACATACTTGAGAGGTGCCTGATGCATTGCCCTCTTCTGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394314] SGN-U579208 Tomato 200607 Build 2 88 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195640 [Download][View] Facility Assigned ID: FA0AAD29CH09RM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5