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EST details — SGN-E394319

Search information 
Request: 394319Match: SGN-E394319
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172626Clone name: TUS-14-A8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172626 is on microarray TOM1 spot ID 1-1-1.1.20.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172626 [TUS-14-A8] Trace: SGN-T195200 EST: SGN-E393874 Direction: 3' Facility: INRA
Clone: SGN-C172626 [TUS-14-A8] Trace: SGN-T195357 EST: SGN-E394031 Direction: 5' Facility: INRA
Clone: SGN-C172626 [TUS-14-A8] Trace: SGN-T195645 EST: SGN-E399010 Direction: 5' Facility: INRA
Clone: SGN-C172626 [TUS-14-A8] Trace: SGN-T195771 EST: SGN-E394445 Direction: 3' Facility: INRA
Clone: SGN-C172626 [TUS-14-A8] Trace: SGN-T195771 EST: SGN-E399009 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394319Length: 488 bp (888 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394319 [] (trimmed) ACGTTCGAATATGGTATCCAATTATTTGGTTTGGAGTTTATAGTTTACAAAATAAGGAACTTACTTGTAATTTTTAATGAAACCCCAAAACAGGG
TTTTGGAAAATCAAACAAAAATCCAATATTACTTTGGATTTTGAAACAAAATACAAAAAATAAAAACACATAATGAAACTACAAGTACAGTATTA
GTTAGTAATTATTATTATTATTATTATTAGCGCGCTAGTTTCAGATCTCTTTTTCAGTGTCTTCTTGTTTGTCACCGTTCCATAAGTCTGAGAGT
GATGGAAGCTTGATCTCGCCGCTATGTGAGAGTGGAATTGTGAAATCTCCGATGACTGGAAGATCAATAGCGAGACCTAATTCCAGTTTATAGTC
AATGTCCCAATCTTTACCAATATCCTTACCCAAACTCACTAACATACTGTGAAGGTACCTTCCCTGGCACATCTAAAAGAGGGGGGGGGGGGGGC
CTTTAAATTCCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394319] SGN-U578486 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195645 [Download][View] Facility Assigned ID: FA0AAD2BA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5