EST details — SGN-E394393

Search information 
Request: 394393Match: SGN-E394393
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182630Clone name: TUS-40-B4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182630 is on microarray TOM1 spot ID 1-1-5.2.6.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133439 [cTOD-5-O16] Trace: SGN-T142752 EST: SGN-E329959 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394393Length: 535 bp (881 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394393 [] (trimmed) GAATATTATCATGAAATGGAAAGAGGTGGTTCTGATGAAGAAGATGGAGAAACTTCTAGAAAGAAATTAAGGCTATCAAAAGACCAATCTGCCAT
TCTTGAAGAAAGTTTCAAAGAACACAACACACTCAATCCAAAACAAAAGCTGGCTTTGGCTAAAAGACTGGGATTGAGGCCTAGGCAAGTTGAGG
TGTGGTTTCAGAATAGGAGGGCAAGGACAAAGTTGAAGCAAACAGAAGTTGACTGTGAGTTTTTGAAAAGATGTTGTGAGAATTTGACAGAGGAA
AACAGGAGATTACAAAAAGAAGTTCAAGAGTTGAGGGCATTAAAGCTTTCACCTCAATTCTACATGCAAATGACCCCTCCCACCACCCTCACCAT
GTGCCCTTCATGTGAGCGTGTCGCGGGCCCACCGCCATCCTCATCTGGGCCCACATCCACACCAAATGGGCCAGGCCCAACCCAGGCCCATGCCA
TTTAACCTATTGGGCCAATGCACTACATTCCGAAAGATGATTTTGCAAAAAGGGCGATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394393] SGN-U573652 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195719 [Download][View] Facility Assigned ID: FA0AAD28DA02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0220 Quality Trim Threshold: 12.5