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EST details — SGN-E394464

Search information 
Request: 394464Match: SGN-E394464
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172830Clone name: TUS-14-I20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172830 is on microarray TOM1 spot ID 1-1-5.1.20.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C11012 [cLEC-6-O19] Trace: SGN-T24102 EST: SGN-E202441 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394464Length: 368 bp (858 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394464 [] (trimmed) AAACAAGGCAATAAGTTACTGGATATTACAAATCATGTAAAAATTCTAATAATGTGATTATGTATGTGTGTGGGGCAAAAGGAAGTATAAATAAA
AGGACAAAAAATGAAGTAACTACAGTGACATCTTCATTTTTCTCCATCTTAATTCTCTTTATCAAGGATGGTAATTTATGTATTAGGTAAAAGAA
TCAAAGCTTCTGAAAAGAAAAGACCAAGTGAATCAAGGCAAGGCAAGAGTAAAGGGACACTTAATCCTGTTCTAAAAATATAAAAGATTTGAAGC
AATAACATCCTTCTCTAGTCATCGCTGCTTCATTTTTCTCCCTGATTGTGCATAAATTCAGAAAGGCCTCATCACTCCCTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394464] SGN-U565389 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195790 [Download][View] Facility Assigned ID: FA0AAD2BE10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.911 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5