EST details — SGN-E394502

Search information 
Request: 394502Match: SGN-E394502
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183016Clone name: TUS-41-B6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183016 is on microarray TOM1 spot ID 1-1-3.2.3.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16242 [cLED-15-L21] Trace: SGN-T52267 EST: SGN-E235694 Direction: 5' Facility: TIGR
Clone: SGN-C183016 [TUS-41-B6] Trace: SGN-T195827 EST: SGN-E394501 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E394502Length: 345 bp (870 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394502 [] (trimmed) ACTAAGGGACAAAAGCTGGATCAGTAGCTGGATAATGCAAACCAATATAAGGCTCCAAATCCGATCTTCTACTCTCCGCCACGACCTCCCCATGC
TCATCATCATGAAACTTATACACCATCACCCGATCATACCCCGTAAGCTCCCTGACACTCTTAACAACAGTATCACACAAAAGATCAATATCCCC
ACCAGGTAACGATTGCAAAAGCGAAATAGCTCTCACAGCTAGCTTCTGCGATTGCACAGCTCCAGCAATAGACAATGCAGGGTCCTCTGTTCTAG
CTGGCTCTAAATCAATCACAATCCCCACATCAATCCTATGCAATATCGCGTAAAAAGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394502] SGN-U570094 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195828 [Download][View] Facility Assigned ID: FA0AAD29DA03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Vector found but pattern inconsistent with a normal insert
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5