EST details — SGN-E394630
| Search information |
| Request: 394630 | Match: SGN-E394630 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183563 | Clone name: TUS-42-I1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183563 is on microarray TOM1 spot ID 1-1-8.1.2.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C32421 [cLEG-1-G9] | Trace: SGN-T64431 | EST: SGN-E248368 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T195490 | EST: SGN-E394164 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T195956 | EST: SGN-E399161 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T200243 | EST: SGN-E399162 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E394630 | Length: 508 bp (826 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E394630 [] (trimmed)
CGGCTGCCGTGTCGCCGCCTCCTAATCTGAAAGGCGCCTTGTTTATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAA
GGAACTGTTAAAGCTACCGACTTTAAGAAAATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACC
CGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCT
TAGAAGTGGCTTATCTTTTAATGTATGGTAATTTACCATCTGAGAACCAATTATCAGACTGGGAGTTTGCAGTTTCACATCATTCAGCAGTTCCT
CAGGGAGTTTTGGATATCATACCGTCCATGCCTCATGATGCTCACCCGATGGGTGTTCTTGTTAGTGCTATGAGCACCCTATCTGTCTTTCATCC
TGATGCCAATCAAGCTCTTAGGGGCCAAAATAT
GGAACTGTTAAAGCTACCGACTTTAAGAAAATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACC
CGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCT
TAGAAGTGGCTTATCTTTTAATGTATGGTAATTTACCATCTGAGAACCAATTATCAGACTGGGAGTTTGCAGTTTCACATCATTCAGCAGTTCCT
CAGGGAGTTTTGGATATCATACCGTCCATGCCTCATGATGCTCACCCGATGGGTGTTCTTGTTAGTGCTATGAGCACCCTATCTGTCTTTCATCC
TGATGCCAATCAAGCTCTTAGGGGCCAAAATAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E394630] | SGN-U573543 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T195956 [Download][View] | Facility Assigned ID: FA0AAD30AE01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0106 | Quality Trim Threshold: 14.5 |
Working
