EST details — SGN-E394668

Search information 
Request: 394668Match: SGN-E394668
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183732Clone name: TUS-42-P2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183732 is on microarray TOM1 spot ID 1-1-7.4.1.1 [Order] [Tomato Microarray Database]
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C183732 [TUS-42-P2] Trace: SGN-T200424 EST: SGN-E399490 Direction: 5' Facility: INRA
Clone: SGN-C183732 [TUS-42-P2] Trace: SGN-T200423 EST: SGN-E399489 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394668Length: 536 bp (820 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394668 [] (trimmed) AAGAAAAATTTATTTGATCAAACTCGTGAGTGAGTACAACTTTCATGTTACAGTCCCCAAAAAGGTATAAAAATCTAAAATAATCGTAACCACAA
TAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCTAATCTCAACAAATACTTCCATGGGAC
AACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACAGTAAAACCAAAAAATAATAACTTCAA
TATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAATGCACCACATGGTCTTCATGAGAACT
GTGAATTGTCATATATCATGAAAACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTAGCATCATAATATGCTTAATAAAACC
CCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAGAAGAATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394668] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195994 [Download][View] Facility Assigned ID: FA0AAD30DH01FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5