EST details — SGN-E394766
| Search information |
| Request: 394766 | Match: SGN-E394766 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183593 | Clone name: TUS-42-J7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183593 is on microarray TOM1 spot ID 1-1-2.2.2.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C34433 [cLEG-30-O1] | Trace: SGN-T69041 | EST: SGN-E255315 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T196092 | EST: SGN-E399394 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T196093 | EST: SGN-E394767 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T200369 | EST: SGN-E399395 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E394766 | Length: 455 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E394766 [] (trimmed)
ATGAAGTTACAAATTTTATCAATCAAAGATAATACTCATGTATTTGAAATTTCGAAATGGTACATTTTCATTCAAGTTAAAAACTTGTGATGTGG
ATGTTCATATTCTAACATATAAAAATTGCATTCATCATCCAACAAAACTGAAAAAGAAATTACATACAGAATGGGTTAAAAAATTAACAGCAAAA
TAAAATTGACAGCTATATCGTAACTTAATCTAAAGTTTCATCCTTCTTGGCTGATTTTGTTCCGAAAGCGATGAAATTAACACTGATGTCATCGG
ACAAGGACCAGCGACCCGTCAAAGGGTTGTACACAAATCCATTTTTTTCTTGCACCGATATAAAAGCGCGCTGAAAAATGAGGACTAATTCTTCT
GGGGTTAGAAAGCTTGACCATTGATGTGTACCTTTTGAAAACCCATGTAAGAAAAAATTCTGCCGCACCAAATGC
ATGTTCATATTCTAACATATAAAAATTGCATTCATCATCCAACAAAACTGAAAAAGAAATTACATACAGAATGGGTTAAAAAATTAACAGCAAAA
TAAAATTGACAGCTATATCGTAACTTAATCTAAAGTTTCATCCTTCTTGGCTGATTTTGTTCCGAAAGCGATGAAATTAACACTGATGTCATCGG
ACAAGGACCAGCGACCCGTCAAAGGGTTGTACACAAATCCATTTTTTTCTTGCACCGATATAAAAGCGCGCTGAAAAATGAGGACTAATTCTTCT
GGGGTTAGAAAGCTTGACCATTGATGTGTACCTTTTGAAAACCCATGTAAGAAAAAATTCTGCCGCACCAAATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E394766] | SGN-U564286 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196092 [Download][View] | Facility Assigned ID: FA0AAD30CE04FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.916 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
