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EST details — SGN-E394863

Search information 
Request: 394863Match: SGN-E394863
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183415Clone name: TUS-42-B21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183415 is on microarray TOM1 spot ID 1-1-4.2.1.6 [Order] [Tomato Microarray Database]
See unigene SGN-U578195 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C32393 [cLEG-1-E17] Trace: SGN-T64366 EST: SGN-E248303 Direction: 5' Facility: TIGR
Clone: SGN-C183415 [TUS-42-B21] Trace: SGN-T196189 EST: SGN-E399343 Direction: 3' Facility: INRA
Clone: SGN-C183415 [TUS-42-B21] Trace: SGN-T200340 EST: SGN-E399344 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394863Length: 378 bp (830 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394863 [] (trimmed) CTGCATTTATTTGTGCATATATTTGCTGAGCTTTCTTAGTTTACTTAGAATCCAGGTAAGCTCTACTCGGTTTCCAGGAACCCATACATTGTATA
CTCTACTAGATTTGACATTGCTAGATGACATCTAATCCTAAGGTAGGGCGAATAACACTACATATATTGATCTCCCTCTTCCCTTTCTTGATGGG
ACGTCGGTGAAATAACCTTCAAATGAAAAAGAAAAAAAAAACGAAATAAAGAAGATTACAAGTCTTGCAAAGGGAAGGATTGAATATTAGCTGAC
TCAAGTGACCAAATCTTGACGGAGGCAGTAACGCTAGCCCCTGTGGCATTTTTTTTTTTAAAAAGTCGTGCTGCTCCGTTTAGTGTGTTGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394863] SGN-U578195 Tomato 200607 Build 2 342 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196189 [Download][View] Facility Assigned ID: FA0AAD30CA11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0065 Quality Trim Threshold: 20.5