EST details — SGN-E394933

Search information 
Request: 394933Match: SGN-E394933
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183967Clone name: TUS-43-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183967 is on microarray TOM1 spot ID 1-1-4.1.18.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14702 [cLEC-8-A4] Trace: SGN-T25153 EST: SGN-E200064 Direction: 5' Facility: TIGR
Clone: SGN-C183967 [TUS-43-I21] Trace: SGN-T1798 EST: SGN-E378624 Direction: 5' Facility: Giov. Lab
Clone: SGN-C183967 [TUS-43-I21] Trace: SGN-T196260 EST: SGN-E394934 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394933Length: 660 bp (857 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394933 [] (trimmed) CAAAAAGGACATCTTGCCTTGGAGTCTTTCAAAGTAAAGACCAAGCTACAAATAATTGATACTACAGAATACAAATTTTGCTAAATTTACAAATC
AACTAGGCTACTATAGCCATGTTCCAAAAAAAATATTTGCCTAGAGACTAAATAATAAACACTATAAAATACAAATTTACTTGAATGTACTAACT
TATAAGGCGATTTCCGCCATGTTGTTCCTTACTGTACACTTTAATCTCGCGAAACTGATGAATCAACCAACCAACTTGAAGGGTGTGCTTACTGC
TCACAACTCCTGCTACTACTCAACAAGAGCAGGAGAATAGGAACAAAAAGAACGAAAGAATGTATCCAGTCACCGCTGCAAATGGTCTAGCTATC
ACAACAAACAGTAGGTAGGAGCTCCTCATTACGGTGGACTCCCAAATCATTCGATAACCTATTACACATCTGTCTATATACTGTTGAATCCCCTG
AAAACTTTTGTAACTCTACAACATACAAGGATGGGCTAATCTCGAAGACCTCAGCAACTACCAATAGACTAGCCGGGTTTTTGTGACCTTTCTGC
TCTTGCATCACTTTCAACCTTCCGTGTCTTTTCTGGACATGAAATCCCATCTGTGTCCCCATATTCTCAATCCTCTCCAACAACTGTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394933] SGN-U575600 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196259 [Download][View] Facility Assigned ID: FA0AAD31AE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0085 Quality Trim Threshold: 14.5