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EST details — SGN-E395138

Search information 
Request: 395138Match: SGN-E395138
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181795Clone name: TUS-37-O9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181795 is on microarray TOM1 spot ID 1-1-8.3.12.8 [Order] [Tomato Microarray Database]
See unigene SGN-U581109 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C22084 [cLED-36-G7] Trace: SGN-T57758 EST: SGN-E241588 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395138Length: 622 bp (855 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E395138 [] (trimmed) AGGAAAACAAGGAGACGTGCTGCTAGACAGCAGAAGGCTGTGAAGATCTTCCCTAGGCCAACAGCTGGTTCACTTCGACCTATTGTTCATGGACA
AACCCTTAAATACAACATGAAAGTCCGTGCTGGTAGGGGATTCTCTCTTGAAGAACTGAAGGCAGCTGGTATTCCCAAGAAGCTAGCACCAACCA
TAGGCATTGCTGTTGATCATCGCCGAAGGAACAGATCCTTGGAAGGTCTCCAAACCAATGTCCAGAGGCTTAAGACCTACAAGGCTAAGCTAGTT
ATCTTCCCAAGGCGTGCTAAGAAGGTCAAGGCTGGTGATTCTAGTGCAGAGGAACTTGCTACTGCCACCCAGGTCCAAGGTCCATACCTGCCTAT
TACTAGGGAGCAGCCTGCTGTTGACTTTGTGAAGGTGACCGATGAGATGAAATCATTCAAGGCCTATGGCAAGCTCCGTATTGAGCGTACAAATG
CTCGACATATGGGAGCCAGGTTGAAGAGGGCAGCTGAAGCAGAAAAGGAAGAGAAGAAATAAGCAATTAAGAGTCATTCTGTAGTCTGTTAAGCA
TTATCAACTTTCTGGTAGGCTTTGTGGTGAAAGTTTTATCATACAATCATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395138] SGN-U581109 Tomato 200607 Build 2 125 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196464 [Download][View] Facility Assigned ID: FA0AAD25AH05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0057 Quality Trim Threshold: 14.5