EST details — SGN-E395152
| Search information |
| Request: 395152 | Match: SGN-E395152 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C182834 | Clone name: TUS-40-J16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182834 is on microarray TOM1 spot ID 1-1-1.2.5.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C128994 [cTOD-10-A20] | Trace: SGN-T144256 | EST: SGN-E330906 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C182834 [TUS-40-J16] | Trace: SGN-T196477 | EST: SGN-E395151 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E395152 | Length: 179 bp (923 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E395152 [] (trimmed)
GTGCCTTTTAACGAACCAACAACACAATCAAACAAATTTTTATTCTCTTTCTACGAACAACTAATAATCTCCTCTTCTTTCAACAAACATGGCGA
TGGCGATAACAACTCTCACCTTAGGATTAGATCTACCCTTTTGATTTTCTTACGTCTTCCCTATTTTTGCTCTATATTTCAACC
TGGCGATAACAACTCTCACCTTAGGATTAGATCTACCCTTTTGATTTTCTTACGTCTTCCCTATTTTTGCTCTATATTTCAACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E395152] | SGN-U583889 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T196478 [Download][View] | Facility Assigned ID: FA0AAD28DE08RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.892 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |
Working
