EST details — SGN-E395191

Search information 
Request: 395191Match: SGN-E395191
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183248Clone name: TUS-41-K22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183248 is on microarray TOM1 spot ID 1-1-3.3.3.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82754 [cLET-21-F22] Trace: SGN-T107824 EST: SGN-E293702 Direction: 5' Facility: TIGR
Clone: SGN-C183248 [TUS-41-K22] Trace: SGN-T200118 EST: SGN-E398792 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395191Length: 606 bp (821 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395191 [] (trimmed) GGCATTGCACCTGAATCAAAGGCAACGACAGAGAGTGTATATAATGCAGCTTTGGCTTTAGGGATCGCAAATCAACTAACCAATATACTCAGAGA
TGTAGGAGAAGATGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGG
TGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCT
GCTAGTAGATGGCCGGTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGC
TTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGA
CATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACAGGTACTTAATTGTAAATGAGCTATCTTTGCTACATGTGT
TTCATCATATCATTAAAAGTAGATTGTAAATTTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395191] SGN-U578302 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196517 [Download][View] Facility Assigned ID: FA0AAD29BF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0013 Quality Trim Threshold: 12.5