EST details — SGN-E395240

Search information 
Request: 395240Match: SGN-E395240
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184780Clone name: TUS-45-K18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184780 is on microarray TOM1 spot ID 1-1-7.3.14.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C84478 [cLET-28-P16] Trace: SGN-T109335 EST: SGN-E297541 Direction: 5' Facility: TIGR
Clone: SGN-C184780 [TUS-45-K18] Trace: SGN-T198630 EST: SGN-E397304 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395240Length: 393 bp (869 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395240 [] (trimmed) CGGGACCGGAGGAGAGTCGATCTATGGAGCCAAATTCAACGATGAGAACTTCGTTAAGAAGCACACCGGCCCTGGAATCCTCTCCATGGCTAATG
CTGGACCTGGAACCAACGGTTCTCAGTTTTTCATCTGTACCGCTAAGACTGAGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAA
GGCATGGATGTGATTAAGAAGGCAGAGGCTGTTGGATCTAGCTCTGGAAGGTGCTCCAAGCCTGTGGTTATTGCTGACTGCGGTCAACTCTAGAT
CTGATGATGATGATGATCTAGTTTTATCAGTCTTTTATGTATTTGAGTCGCCGTTTTAGGCTTTGTTTTTAATTTCAAACTATCTCTACTGCTTT
GGTCGGGTCGTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395240] SGN-U577630 Tomato 200607 Build 2 444 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196566 [Download][View] Facility Assigned ID: FA0AAD33BF09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0002 Quality Trim Threshold: 14.5