EST details — SGN-E395270

Search information 
Request: 395270Match: SGN-E395270
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185256Clone name: TUS-46-O14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185256 is on microarray TOM1 spot ID 1-1-3.3.12.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46552 [cLEI-12-P12] Trace: SGN-T82218 EST: SGN-E267799 Direction: 5' Facility: TIGR
Clone: SGN-C185256 [TUS-46-O14] Trace: SGN-T1883 EST: SGN-E378477 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E395270Length: 492 bp (813 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E395270 [] (trimmed) TTCGAGTCTGGAAGGCATGCTAAAGAGCATGCACCACCAACAAAGCGCCGAAGAGGGGGAGAGGTTGGTTTGTCAAATATTTTAGAAGAAATTGT
TGATACACTGAAGAACAATGTGAACGTATCATACCTCTTCTTGAAGCCAGTGACCCGAAAGGAAGCTCCAGATTATCACAAGTATGTAAAACGCC
CTATGGACCTATCTACCATCAAAGAGAAAGCCAGGAAACTGGAATATAAAAACCGTGGGCAATTCAGGCATGATGTGGCACAGATCACTATCAAT
GCACATTTGTACAATGATGGGCGCAACCCAGGTATTCCTCCCCTTGCGGATCAGCTTCTAGAGATTTGTGACTACTTGCTGGAAGAGAATGAGTC
CATCTTAGCTGAAGCTGAATCTGGTATTGAGTGATGATACTTCATATTTGAGGGGGGGGGGGGGTCTATTTTAAATTCAATTAAACAATCTTTCT
TTGTTTACTCACAATCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395270] SGN-U572106 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196596 [Download][View] Facility Assigned ID: FA0AAD34BH07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5