EST details — SGN-E395291

Search information 
Request: 395291Match: SGN-E395291
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172979Clone name: TUS-14-P1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172979 is on microarray TOM1 spot ID 1-1-8.4.20.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14412 [cLEC-7-N16] Trace: SGN-T25355 EST: SGN-E202073 Direction: 5' Facility: TIGR
Clone: SGN-C172979 [TUS-14-P1] Trace: SGN-T196616 EST: SGN-E395290 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395291Length: 638 bp (842 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395291 [] (trimmed) CCCCTCCACAACTCACCAATCTCATCCTCGATTTGAGCGCCTCTTACTCATGGATCGATTGTTCCAATTCCTCTACTCATCGTTCTCTTTCCTGT
AATTCCCCTTTATGCTCTGCTATTGGATCTCGCGCTTGTGCTAAGTGTTTTCATTCCACTAATAGCGATGATTGTTCCACTAGCCCTTGTGTTCT
CTCTCCGTTAAATTCTGTTACTCATAAATCGTCTACCGGCAAAGCTATTGTTGAATCGATAGCTTTGCCGGTTACCGATGGGAGGAATCCGGGTC
AAGTTAGGGTTTTTTCTGAGTTTTTGTTGTCTTGCTCGAAGAAATCTTTGCTTAAAGGACTTACCAAAGGTGTAGTCGGTTTAGCCGGGCTAGGC
CGGTCCAGATTCTCACTCACTACTCAGGTCAGCACTTCTCTGTCTTCTACACGCACTTTTGCGTTATGTTTATCCGGTTCACCGTCTGCTCCTGG
AGTTGCTTTTTTCGGTTCAACCGGACCCTATTATTTTTTACCCGAAATTGACCTTTCAAAAACCCTTCGTTACACTCCATTCATTCCAAACCCGG
TTCAGTCTAATTATTTCATTAATTTGACTTCCATAAAAGTTAACGGAGTTACCGTACAATTAAACCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395291] SGN-U582319 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196617 [Download][View] Facility Assigned ID: FA0AAD2CH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0078 Quality Trim Threshold: 14.5