EST details — SGN-E395299

Search information 
Request: 395299Match: SGN-E395299
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172991Clone name: TUS-14-P13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172991 is on microarray TOM1 spot ID 1-1-4.4.20.8 [Order] [Tomato Microarray Database]
See unigene SGN-U575402 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C14438 [cLEC-7-O4] Trace: SGN-T25281 EST: SGN-E201999 Direction: 5' Facility: TIGR
Clone: SGN-C172991 [TUS-14-P13] Trace: SGN-T196624 EST: SGN-E395298 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395299Length: 728 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395299 [] (trimmed) TATTTCTCTGCTTTTTTTTTTCTCCCATTCATCATTCTCTCTTTGGCTCATTCTCCCAGAAAAAAACATTCTCTTCATCCGCCATTAACGCTCGC
CGCATCACAAGCTTCGCTCCATCAACAGCACCATTTTTTTTTGATCTTCCAATAGTCAAAGAGGTTGGAGGATCAGATCTAGGAGTTGAAATCAT
GTCGTTTACAGGGACTCAACAGAAATGTAAGGCTTGTGAAAAAACTGTTTACCCAGTTGAGCTTTTGTCAGCTGATGGGATTAGTTATCACAAAT
CTTGTTTCAAGTGTACTCATTGTAAAGGAACTCTCAAGTTGAGCAGTTACTCCTCAATGGAAGGTGTTCTGTATTGCAAGCCTCATTTTGAGCAG
CTCTACAAGGAGTCTGGCAACTTCAATAAGAACTTTCAATCCCCTGTGAAGTCAGCTGAGAAGTTAACTCCAATGCTGACAAAATCTCCAAGCAA
AGCTGCCGGCATGTTTTCTGGGACACAGGAAAAATGTGCCACCTGCGGTAAAACGGCTTATCCACTTGAGAAGGTGACAGTGGAGAACCAAAGTT
ATCACAAGTCGTGTTTCAAGTGTTCTCATGGTGGGTGCTCTTTAAATCCTTCGAATTATGCTGCCCTAGATGGGATATTGTACTGCAAACCTCAT
TTTTCACAGCTTTTCAAGGAGAAAGGCAGCTACCATCATTTAATCCAGTCTGCTTCAATGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395299] SGN-U575402 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196625 [Download][View] Facility Assigned ID: FA0AAD2CH07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5