EST details — SGN-E395462

Search information 
Request: 395462Match: SGN-E395462
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173515Clone name: TUS-16-F9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173515 is on microarray TOM1 spot ID 1-1-8.2.18.12 [Order] [Tomato Microarray Database]
See unigene SGN-U575706 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C3288 [cLEC-20-B23] Trace: SGN-T27788 EST: SGN-E206006 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E395462Length: 589 bp (892 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E395462 [] (trimmed) CTTGTGGCTATACCATTGCACAACAAGCCGTCTCTTTTTCACAGCATCAAATCACTTTTTATGAACAAGCCGTTGATGATTGTATGCAACAAAAC
AGACTTGCAGCCATTACAATGGATTTCTGAGGAAGATAAAAAGCTAGTTGCGGAGATGAAAGATGAAGCTATGAAGACAGTGATTGGTCAAGGTG
GTGAGGCGACAGATGAAGCAGGTGTGCTGTTAACTATGAGCACTTTGACTGAAGATGGCGTAATTTCAGTGAAGAATGCAGCTTGTGAGAGGTTA
CTGAATCAAAGAGTTGAATTGAAAATGAAATCGAAAAAGTTAAATGACTGCTTGAACCGCTTCCATGTTGCTATGCCAAAACAACGTGACCAGAA
AGAGAGGCCAGCATGCATACCTGAGGCAGTGTTGGAAGCCAGAGCGAAGCAGGCTGAGGCAGATGCTGAGAAACAGAAAAGGAAGCTTGAGAGAG
ATTTGGAGAATGAGAATGGAGGTGCTGGTGTTTATTCTGCAAGCTTAAGGAAGCACTATCTATTAGCCAATGAAGAGTGGAAGGAAAATATATTG
CCTGAAATTTTTAAAGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395462] SGN-U575706 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196788 [Download][View] Facility Assigned ID: FA0AAD4CC05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5