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EST details — SGN-E395715

Search information 
Request: 395715Match: SGN-E395715
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174118Clone name: TUS-17-O12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174118 is on microarray TOM1 spot ID 1-1-5.3.17.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7038 [cLEC-37-J24] Trace: SGN-T31283 EST: SGN-E208292 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395715Length: 476 bp (860 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395715 [] (trimmed) ATATACCCTACTCTCAAGCAAAAGTGATATCAAACCTCCTATAATATTTACAAAGTATATTTATACCAACTTCTTTTATAAAATGCTTGGAATTC
AAAAACACTCTTTAAAAGGAAAAAAAAAAGTAAACAAGGGGGCTTAGCTCATCCGCATGTCTCGATGATCCATTTGTATGACTGGCAAACTATAA
CTAATAAACTTTCAGCTGTTGGATTATTCTACTCTAGGGGGGATGGATAAAGAAGGAAAACCAAAAGGTCAAAAAAGAAAAATACTGATATTTAT
ACAAAAGTGGATTATGGCAACTCTTCCTATTTTTACTCTTCATCTGCGCCTTCGCTGACCTTGATCTCCAAGAGGCGTTCAACTGGCTGTCAACA
GATGGGACAGCGATTCCTCTGGAACCTCAAAACCTTTGCACATCCGCTACACATACACTTGTGCCAACATGGAAGTACAGTGGTATCCCCAGGTT
C
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395715] SGN-U589312 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197041 [Download][View] Facility Assigned ID: FA0AAD5BH06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.931 Expected Error Rate: 0.0157 Quality Trim Threshold: 20.5