EST details — SGN-E395720

Search information 
Request: 395720Match: SGN-E395720
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174128Clone name: TUS-17-O22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174128 is on microarray TOM1 spot ID 1-1-3.3.17.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7058 [cLEC-37-K21] Trace: SGN-T31173 EST: SGN-E208182 Direction: 5' Facility: TIGR
Clone: SGN-C174128 [TUS-17-O22] Trace: SGN-T197047 EST: SGN-E395721 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E395720Length: 685 bp (839 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395720 [] (trimmed) AAATACCCATTAAAAAGTACTATTCAACTTCCAAAACAAATAAACAACCCTATCTATATATTGTGGTATAGATTATTATATAATAACAAGGTGAA
TTAACATGAGAAATGAATAATTGTCACATTCTTGTTCTGTCCATTTTCCAGTAGCGGCTAGTTGGAAAATTTGTTGTAACATGTAACACAGGCTG
TCCACATTCTACTCCAGAGAGAAAGTTGGTAAGTAGTGGGGGCAAAAGATAGAGACCCCAATAGCTATCAATTCACTTTGTTGACAATCAAGATT
TGAGAAAAAAGATCAAAACTTTACCAACTTAGATAGCTCCATAATCAACTGTAGGTACAATTCTTTAGTGAAATTGCGGCGTTCATCTTCTGGGG
ACGAAGAGTAAGTAGACAATCAATTGTCTTGTAGAACTTGGGCTTTACCATTTTCCCTAAAACATAAGCTCTTGATCGAAGCTTGAAGTTTAATT
TTAGTGGCACTGGTAATGGCGTCGCCCCTGCTGGTGTGCTCAAACTTGCTCCACCTCCATATAATGGAATCTTGTTCCCTATAACTGATACAGCT
ACAACTCTTTGGCTCTTTCTTGATTGGTAAAATTTCTTCATAGCTCCGGATCCAATTGTGAGTTCTGAAAATGAGAGATCAAGAGGGGTTGATGT
GAACTGTACACCGAAAAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395720] SGN-U563843 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197046 [Download][View] Facility Assigned ID: FA0AAD5BH11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5