EST details — SGN-E395746

Search information 
Request: 395746Match: SGN-E395746
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173864Clone name: TUS-17-D22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173864 is on microarray TOM1 spot ID 1-1-3.4.17.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5739 [cLEC-32-N6] Trace: SGN-T30061 EST: SGN-E207848 Direction: 5' Facility: TIGR
Clone: SGN-C173864 [TUS-17-D22] Trace: SGN-T197071 EST: SGN-E395745 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395746Length: 551 bp (825 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395746 [] (trimmed) CAGAGATAGGGGATTCATGTCGGGCCCGATGGAAAGGAGTTTCACTTCGGGCCCGTTGGAGAATCAGTATGATCCTATACAAATACAAAGGTATA
AACTGAAACCTAAGAAATGGGGTTTGATAAGAAGTTTAAAGAAAGCTTTTTCGAGTTCTTTTTTTGGTTATAAAGAAGTGAAATTTACTGAAAAG
AATATTGTTAATGTTAGTGAAATTAAATTTGTAGATTGTGATAATAATAATGTTGGAAATGTTTTGAGTAGTGAAAATAGTTTGGTTGATGATGA
TGATGATGTAAATGAATCATTTACTGGGCAAAATGTTCAATGGGCACAAGGTAAAGCAGGGGAAGACAGAGTACATGTTGTGATTTCTGAGGAAC
ATGGATGGGTTTTTGTTGGGATTTATGATGGATTTAATGGACCTGATGCTACTGATTTTCTGTTGAGTAATCTTTATTCAAATGTTTATAAAGAA
CTTAAAGGATTGTTATGGAATGATAAGTCGGAAACTCCCAAGAATTCGATGAGTAATGAGAAGGTGGAACATTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395746] SGN-U585638 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197072 [Download][View] Facility Assigned ID: FA0AAD5DB11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.918 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5