EST details — SGN-E395771

Search information 
Request: 395771Match: SGN-E395771
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173956Clone name: TUS-17-H18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173956 is on microarray TOM1 spot ID 1-1-7.4.17.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6458 [cLEC-35-H9] Trace: SGN-T30863 EST: SGN-E210515 Direction: 5' Facility: TIGR
Clone: SGN-C173956 [TUS-17-H18] Trace: SGN-T197098 EST: SGN-E395772 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395771Length: 611 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395771 [] (trimmed) AAAAAGAGGCAAGACATGGAACAGTAATACAAAAGAAAAATCTGAGTATTGCTTCCTTTAGTGAGAAACATAAACCTTCAAAAGTTTGCAGGTTC
ATAAAAAATGATCAACTAAATAAATAAGTCTTGGGCTTTTTCTCACATCGTCGAGGAAATGGTCTACAGGAAAGGAGGCAATATCACCCATCGTC
GAGGATACTTTGGTCTTCCTTCCTTTCCATCAAAGAGCTTCTTCAGACGACGATGCTTTCCAAGAGCCCAGTTAGTCATAATGCTAGCAGCAACA
ATCATGAAGATATAGCCAGCAACAGTCTGAGTAGCAATGTTGAAGCCCAACCACTGGTAAATCTCTGTTGTGTAATTTGCACAGGTGACAATATT
GAACAAAAAGCCACGGGGTATTTGGTAACCTCCATTACCACTGGGACTTCTAAGATTTCTCAACAATAAATGACAATACAAGTTTGCCACTTGAC
AAACTATCCCAAATCCAAATCCAATCTTCATCTGGAGATCACTAACAGGAGTATAAAGAGGATGATTCACGAAGTAAGCAATGAAAGCTCCAAAA
GACCAATAATAGGCACAGTTCCGGAAAACATTGGAAATTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395771] SGN-U567018 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197097 [Download][View] Facility Assigned ID: FA0AAD5DD09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5