EST details — SGN-E395839

Search information 
Request: 395839Match: SGN-E395839
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174134Clone name: TUS-17-P4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174134 is on microarray TOM1 spot ID 1-1-5.4.17.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7076 [cLEC-37-L21] Trace: SGN-T31410 EST: SGN-E208419 Direction: 5' Facility: TIGR
Clone: SGN-C174134 [TUS-17-P4] Trace: SGN-T197164 EST: SGN-E395838 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395839Length: 450 bp (828 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395839 [] (trimmed) CAACCCACATAAAAGTTTTTACTAGTGCAACATAAAGACACTGAAGAAAATAAAAACAGACCGGCATTTTACAGCCTACATCATGGCTTAGTACT
CCTCATCATCTTCACCATCTGCTTCATCATCACCTTCAGCACCAACCTCCTCATAATCCTTCTCGAGGGCAGCAAGATCTTCACGTGCTTCACTG
AATTCACCTTCCTCCATACCCTCACCGACATACCAAGGCACAAAAGCACGCTTGGGGTACATCAAATCAAACTTGTGGTCAATGCGTGAGAAGAC
CTCACCAACACTTGTTGAGTTGGAGATCATGCACACAGCCCTCTGTACCTTAGCAAGGTCACCACCAGGAACAACAGTTGGTGGCTGATAGTTGA
TACCACACTTGAATTCCTGTGGGACACCAGTCAACAAATTGGATGGGGCGCTTAATCTTGATGGGGGCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395839] SGN-U578499 Tomato 200607 Build 2 308 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197165 [Download][View] Facility Assigned ID: FA0AAD5DH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5