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EST details — SGN-E395921

Search information 
Request: 395921Match: SGN-E395921
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174335Clone name: TUS-18-H13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174335 is on microarray TOM1 spot ID 1-1-4.4.16.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7991 [cLEC-40-O6] Trace: SGN-T32161 EST: SGN-E210097 Direction: 5' Facility: TIGR
Clone: SGN-C174335 [TUS-18-H13] Trace: SGN-T199855 EST: SGN-E398529 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395921Length: 622 bp (849 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395921 [] (trimmed) AAATCAAATTATAAAAATATTTATTTGAGCAAATCCAACACTTTAATTTCAAGGGCCACCAAAAGTCTCAATCTTGTGAGACTGAAAAGGAGCAA
ACTGAGACCTAACTAATATAGGCTGCTATAGAAAATTAGCCCATCCCATTTTCACGTGCACTTACTAGTCCTACCTACTGGCTACTGTTCTCCCA
AAAAAAAAGAAGACAAATATAGTAAACAATATATACAATTTATAACGACATGTCCTAGTGGCTGCCTGTCTTTCTCTGGAACATTTCAATGTGTC
AACATAATTTTCGTTTTAATTATTTATCCTTAGTGTTACTATTATTTTGCAAGAATTTTCCTGATATGGCGGCTGCTAAGGCTGCTTGAAAACTT
GGATCTTTAGTCAATGATGAAGCCATTTGTTCTATCAAGAAATGTTGAAACTCTGGTCTATTTTGCTGTTGTTGATCAGTTCCTGGTGATTTACG
CTTCTGACCACTTGCACTACTTGTACTTGTAATGCTATGAACTTTTTTGATATCATTTTGTAATGTTTTTGGTTCTGCCAAATCAAGAGTTAAGG
TTTGTCTTGGCATTACCGCCGCAGCATAAGTATTATTTTTCGGGTTAAATCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395921] SGN-U566776 Tomato 200607 Build 2 101 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197247 [Download][View] Facility Assigned ID: FA0AAD6CD07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5