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EST details — SGN-E396048

Search information 
Request: 396048Match: SGN-E396048
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174476Clone name: TUS-18-N10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174476 is on microarray TOM1 spot ID 1-1-7.2.16.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23097 [cLED-4-H4] Trace: SGN-T49520 EST: SGN-E231751 Direction: 5' Facility: TIGR
Clone: SGN-C174476 [TUS-18-N10] Trace: SGN-T197375 EST: SGN-E396049 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396048Length: 486 bp (841 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396048 [] (trimmed) ACGTTCAAATATTGTATCCAATTATTTGGTTTGGAGTTTATAGTTGACAATTTAAGGAACTTACTTGTAATTTTTAATGAAACCCCAAAACAGGG
TTTTGGAAAATCAAACAAAAATCCAATATTACTTTGGATTTTGAAACAAAATACAAAAAATAAAAACACATAATGAAACTACAAGTACAGTATTA
GTTAGTAATTATTATTATTATTATTATTAGCGCGCTAGTTTCAGATCTCTTTTTCAGTGTCTTCTTGTTTGTCACCGTTCCATAAGTCTGAAAGT
GATGGAAGCTTGATCTCGCCGCTATGTGAGAGTGGAATTGTGAAATCTCCGATGACTGGAAGATCAATAGCGAGACCTAATTCCAGTTTATAGTC
AATGTCCCAATCTTTACCAATATCCTTACCCAAACTCACTAGCATACTGTGAGGTACCTTCACTGGCACATCTAAAATAGTTGGGGGGGTTGCCT
TTATATTCCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396048] SGN-U578486 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197374 [Download][View] Facility Assigned ID: FA0AAD6DG05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0084 Quality Trim Threshold: 14.5