EST details — SGN-E396086

Search information 
Request: 396086Match: SGN-E396086
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174601Clone name: TUS-19-C15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174601 is on microarray TOM1 spot ID 1-1-2.3.15.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23281 [cLED-4-P3] Trace: SGN-T49323 EST: SGN-E231554 Direction: 5' Facility: TIGR
Clone: SGN-C174601 [TUS-19-C15] Trace: SGN-T197413 EST: SGN-E396087 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396086Length: 355 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396086 [] (trimmed) AAAAATACACTTTTATCTAGTTTTGTAATAATTAAAAAAGCATAATTACTCTTTATAATATCCATGTAACATGCGGACAAGAATACTAGTAAAAC
CTAATAATCAAGTACATCTAAGAACTTCTTTATGTCAATTTTATGATGTGAACTTTACGAAAATAATTAATCAAATTCACTGTTTGCGCAAATGA
TATACTCTTAACACAATATGGGATTAAAAAAACACAAGCACGAACATCTGCAACTTTAGATGTCACTTGTCTCGACAGGTTATAAGCACCCGCAA
CTTTTTCAACAAAATCAGATAGTCCTCCCAAAATTTTCAATAAAATCCCTACGAAATTTTTTTTTTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396086] SGN-U580948 Tomato 200607 Build 2 60 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197412 [Download][View] Facility Assigned ID: FA0AAD7AB08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5