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EST details — SGN-E396254

Search information 
Request: 396254Match: SGN-E396254
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182763Clone name: TUS-40-G17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182763 is on microarray TOM1 spot ID 1-1-8.3.5.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C112101 [cTOA-13-P3] Trace: SGN-T125767 EST: SGN-E313485 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396254Length: 586 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396254 [] (trimmed) CGATTCTTCTTCATTAAATTCTCGTAACTTGAGTCGGAATCATTAATAATACTCCGGCACAGATAAGATTTAAAGGCGATACAAACATTGTTCAC
AAAAAATTAAAGACTTAGGTACTAATCTAACAAACTTTTTGATTATATGTTTGGAACTTTAGAATCCGTCTGGCTTGAAAGCGATGAACCTGATG
CGCTGAACTTGACCAACTTTGACGAATCCGATAATACCAACCCGGGCTTGCGGGTACGCCTTCTTCGCCTCTTGAACCTCATCCAACACCTGTGT
TGCATCAGTGCACCCAAACATACGTAACTTCCACATGGTCCAGTATCTACCATCGGAGTATCCAGGGGAACTGTTGTTCTCTCGGTACACAAATC
CGCGCTGTTACATACATATATTACAAACAAACGACAGTTCAAATTATTTTTATAACTTCAAATAATTAGATAAATCATTAAATAAAGTACAAGAT
ATTGACCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAAAAGATACTCAATTTCGCTAAGCAATTGCTCATCGGACAAGTCAGGAA
GGTAAGACAATGTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396254] SGN-U578258 Tomato 200607 Build 2 58 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197580 [Download][View] Facility Assigned ID: FA0AAD28AD09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0296 Quality Trim Threshold: 14.5