EST details — SGN-E396304

Search information 
Request: 396304Match: SGN-E396304
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184209Clone name: TUS-44-C23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184209 is on microarray TOM1 spot ID 1-1-2.3.16.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24173 [cLED-7-G3] Trace: SGN-T50312 EST: SGN-E231803 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396304Length: 743 bp (845 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396304 [] (trimmed) AAAGAAATGTATCACTATTGAATCTTGAACGGAAAAAGGACAGAAAGAAATCAGAGTTATATTTACAATACATATATCAGGTATAAACTGCAATA
TCAAAAATGCTGTGGGACACTTCAATTCTATGCTGTAACAGAACTCAATATTATACAGAGGACAAATAAAAGCCTCAAGAAGAAATAATAATCAA
ATAATAGTTGAAAAAGGAAAATATAGCCATCATAAGTTGGTAATAGAAGGAATTCAAATGTGGTGCATGGTTTCCTGCAGGTCTAGATGATGGAA
CAGATGGGAACGATGTAGCGGGTTCATTTGCACTTGCATTTCCCTTGGTGGCCTCGGGCACCACACTGGCAGGCGAAGGCGCTTCGGTAGAATTG
CGCTTGTTCACGGGCAGAGTTGTTGATCTATCGTTTGATTCTCCAGAATCATAACAATCAGAGGCTTTCCAACCCAAAACCATCTTCTCCCGATC
AAATATTACGTGATAGCCAGTCATGAAATTTTGTCCAATGATGTTGACATCCCCACTTTTCACAACAGCTAAACAGTATGCGCCTGAACCGTCCG
GGAGTGAGAGCATTATTATCGGATCGAAAAGATAAAATTGGTTGCCACCTTTCATTGTCAAATTTACGTCTGGAACTTCAAATGTAGTTTGATTT
GCACTTATCCCATAGCAGTACTCAAAAGGAATTGTGCCATCAGGTTGAATACGTGGCTGTTTTGCTTCAGAATCGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396304] SGN-U574299 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197630 [Download][View] Facility Assigned ID: FA0AAD32AB12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5