EST details — SGN-E396305

Search information 
Request: 396305Match: SGN-E396305
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184255Clone name: TUS-44-E21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184255 is on microarray TOM1 spot ID 1-1-4.1.16.10 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C24473 [cLED-8-G3] Trace: SGN-T50762 EST: SGN-E232829 Direction: 5' Facility: TIGR
Clone: SGN-C184255 [TUS-44-E21] Trace: SGN-T191879 EST: SGN-E390553 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E396305Length: 564 bp (856 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396305 [] (trimmed) AATTCATCATAATTAACTGAAAAAGAAAGAAGAAAAAAAAAGGCAATAGTACAATTTGTTTTTAAGCTAAAGTAAAAATAAAAAGGCCAATCACA
ACTTTTTTTTTGGGAACAAAGCTAATAAAAGAGTCTAAAAGACACCTCATATAGTCAAACTAGTAGTACTTAGTAATCCTATGTACAACATATTA
TTGTTCAAAGAAACTTAGCAAATGCCTTTGGAGTTTGGACAACTAGAGTCGTACGAGATCTATCAAAAATAGTTTCTCTACCTATACAGGATAGA
GACAAGACTGTGCGCTTGCTTGTGTACGTGCGTACATATAATTATCTTCAGACTCCACTTGTGGGATTTATACTGATCTAAAGTAGGATCGAGCC
AAATCTTGTAACCTAACAACTCAATATTGCCAGAACCAACAAGGTTGATCTTCAATTTGGAAACTCAAATTGGATGAATTCGCTTGAATTTGATC
TCCGATTTCGGGGAAATATAGAAAGTTCTTGCTTAGGTTGTCATCTTCATCTCGAGAAAAATCAGATGGCTCTTGTTCAAATACATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396305] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197631 [Download][View] Facility Assigned ID: FA0AAD32AC11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5