EST details — SGN-E396539

Search information 
Request: 396539Match: SGN-E396539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176707Clone name: TUS-24-K9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176707 is on microarray TOM1 spot ID 1-1-8.3.9.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27660 [cLEF-45-C10] Trace: SGN-T61257 EST: SGN-E246522 Direction: 5' Facility: TIGR
Clone: SGN-C176707 [TUS-24-K9] Trace: SGN-T197827 EST: SGN-E396501 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E396539Length: 281 bp (922 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396539 [] (trimmed) GCGATTGGGTACGGGCCCCCCCTTTGTCACATGTCTCCTTCATTAGCACAACTTTTTGTGTTCTCCATCATTTTAACTTCTTCACATTTGTTCAT
CCCAAATCAAAAAACAATAAAAAGAAAAGGTTTTTTTTTATCATACAAATAAATAACAGTTATATTATGGAGGGAAATATTAAAGATGTTATCAT
ATATTGGATAGAAGGAGAAATTGAAAATTTTATTAAGGTATGGTTATTAATTTATGTATCACTTTGTTATTGTTATTTATCATCTAAAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396539] SGN-U585185 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197865 [Download][View] Facility Assigned ID: FA0AAD12AF05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.896 Expected Error Rate: 0.0016 Quality Trim Threshold: 20.5